Supported Software
This page lists software packages that SHARCNET officially supports. Click on the package name for full version availability and usage documentation. Community contributed information for some less commonly used packages may be found in the User-Installed Packages table. If you need help building a package or would like to request SHARCNET officially support a package please contact us.
| Application | |
|---|---|
| ADF/BAND | Amsterdam Density Functional Software (group: adf) |
| ANSYS | Fluent, CFX and Icemcfd CFD Software Collection (group: ansys) |
| ESPRESSO | Plane-Wave Self-Consistent Field (PWSCF) |
| GEANT4 | The Geant4 Toolkit |
| LAMMPS | Large-scale Atomic/Molecular Massively Parallel Simulator |
| MATLAB | MATLAB and Parallel Computing Toolbox (groups: matlab, uwmatlab) |
| NCBIC++TOOLKIT | Free, portable, public domain libraries with no restrictions use |
| OCTAVE | High Level Language (mostly compatible with matlab) |
| PYTHON | Powerful Dynamic Programming Language (incudes numpy and scipy) |
| R | Language/environment for statistical computing |
| SPARK | Fast and general engine for large-scale data processing |
| Bioinformatics | |
| AUTODOCKVINA | Open source molecular modelling docking program. |
| BIOPERL | Toolkit of Perl Modules For Bioinformatics |
| BLAST | Basic Local Alignment Search Tool |
| Commercial | |
| ABAQUS | Abaqus Unified FEA Suite from Dassault Systemes SIMULIA Corp (groups: abaqus, uw_abaqus) |
| FDTD | Lumerical FDTD for High Performance Microscale Optics Simulation (group: fdtd) |
| LSDYNA | General Purpose Transient Dynamic FE Program (group: lsdyna) |
| Compiler | |
| GCC | GNU Compiler Collection |
| INTEL | Intel Compilers and Performance Tools |
| LLVM | The LLVM Compiler including clang, openmp, polly, lld, and lldb |
| PERL | A highly capable, feature-rich programming language |
| Data | |
| HDF | Library and File Format to Store Scientific Data |
| Debugging | |
| DDT | Powerful Parallel Debugger with Graphical Interface |
| GDB | The GNU Project Debugger for c, c++ and many more languages |
| Library | |
| ACML | AMD Core Math Library |
| BOOST | Free peer-reviewed portable C++ source libraries |
| FFTW | Library for Computing the DFT |
| OPENMPI | Open source MPI implementation |
| PETSC_SLEPC | Parallel solver for systems of PDEs and Scalable Library for Eigenvalue Problem Computations |
| Profiling | |
| MAP | MPI profiler |
| Utility | |
| BINUTILS | A Collection of Recently Updated Binary Tools |
| DAR | Disk ARchive utility |
| EMACS | An extensible, customizable, free/libre text editor |
| GIT | The Fast Distributed Version Control System |
| MONO | Runtime implementation of the ECMA Common Language Infrastructure. |
| NINJA | A small build system with a focus on speed. |
| SUBVERSION | A Full-Featured Version Control System (SVN) |
| SYSTEM | Updated system packages compiled with the gcc system compiler |
| Visualization | |
| LSPREPOST | Advanced pre and post-processor for LS-DYNA. |
| OPENCV | A Library of programming Functions for Real Time Computer Vision. |