Publication: Conformational study of Met-enkephalin based on the ECEPP force fields
All || By Area || By Year| Title | Conformational study of Met-enkephalin based on the ECEPP force fields | Authors/Editors* | Lixin Zhan, Jeff Z. Y. Chen, Wing-Ki Liu |
|---|---|
| Where published* | Biophys. J. |
| How published* | Journal |
| Year* | 2006 |
| Volume | 91 |
| Number | -1 |
| Pages | 2399-2404 |
| Publisher | |
| Keywords | basin paving, protein folding, global optimization, met-enkephalin |
| Link | |
| Abstract |
We report a computational study of the small peptide Met-enkephalin based on the ECEPP/2 and ECEPP/3 force fields using the basin paving method. We have located a new global minimum when using the ECEPP/3 force field with peptide angles fixed at 180 degree. With this new result, we can conclude that the lowest energy configurations of Met-enkephalin predicted based on all four versions of ECEPP have a classic beta-turn centered at residue Gly3 and a gamma-turn at residues Gly3-Phe4. However, minor differences between the structures also exist. |
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